PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_009787574.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family ERF
Protein Properties Length: 331aa    MW: 37487 Da    PI: 7.7455
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_009787574.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2605.5e-19159209256
             AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56 
                      y+GVr+++ +g+WvAeIr p++   r+r +lg+f+tae+Aa a+++ + kl+ge
  XP_009787574.1 159 LYRGVRQRH-WGKWVAEIRLPRK---RTRLWLGTFDTAEDAAMAYDREAYKLRGE 209
                     59******9.**********954...5**************************97 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000181.09E-33158218No hitNo description
SMARTSM003806.7E-38159222IPR001471AP2/ERF domain
PROSITE profilePS5103222.998159216IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.102.2E-32159217IPR001471AP2/ERF domain
SuperFamilySSF541711.57E-22159217IPR016177DNA-binding domain
PRINTSPR003674.7E-11160171IPR001471AP2/ERF domain
PfamPF008472.4E-12160209IPR001471AP2/ERF domain
PRINTSPR003674.7E-11182198IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0009651Biological Processresponse to salt stress
GO:2000070Biological Processregulation of response to water deprivation
GO:0005634Cellular Componentnucleus
GO:0005737Cellular Componentcytoplasm
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 331 aa     Download sequence    Send to blast
MNWQRENGKD FNTSLQKKIK SPEHQLCFQS SVPYTTPPHT AFSPPPLSSS TSRSPRVVFP  60
FALDGTQQSI ESLHQLRSNS TPLFHPTHQN QQQMISFSAQ HPQYFSRELG PFQHQLQHCH  120
ETLNLSPRRR TTMLNTLGQS NRVPLFSPLL QHPYSMTKLY RGVRQRHWGK WVAEIRLPRK  180
RTRLWLGTFD TAEDAAMAYD REAYKLRGES AKLNFPELFL GINKAASPEN LQLQQPQQPP  240
SGCGNFEEEI GSSEVIAIDG VQGNVESCGA TLSDFEAWLN AIPEGWGPGS PVWDDLDTNN  300
NLILPHNINF GDFHQQKPHN SDLLGTMKPL G
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1gcc_A3e-21158216160ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 1
2gcc_A4e-21158216463ATERF1
3gcc_A4e-21158216463ATERF1
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009787574.10.0PREDICTED: ethylene-responsive transcription factor ERF054-like
RefseqXP_016476340.10.0PREDICTED: ethylene-responsive transcription factor ERF054-like
SwissprotQ9SKT13e-58ERF53_ARATH; Ethylene-responsive transcription factor ERF053
TrEMBLM1BKF05e-93M1BKF0_SOLTU; Uncharacterized protein
STRINGPGSC0003DMT4000472651e-92(Solanum tuberosum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA47182136
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G20880.15e-59ERF family protein